Index

A

addnode() (in module schimpy.sms2gr3) adjust_dt() (schimpy.param.Params method) air_pressure (schimpy.params.HydroOutput attribute) air_temperature (schimpy.params.HydroOutput attribute) alphaw (schimpy.params.Opt attribute) appears_done() (in module schimpy.combine_consume) archive_blocks() (in module schimpy.combine_consume)

ArgumentParserYaml (class in schimpy.schism_yaml) attribute (schimpy.schism_polygon.SchismPolygon property) autoscale() (schimpy.three_point_linear_norm.ThreePointLinearNorm method) autoscale_None() (schimpy.three_point_linear_norm.ThreePointLinearNorm method) average() (schimpy.gaussian_quadrature.GaussianQuadrature method) (schimpy.gaussian_quadrature.GaussianQuadratureLine2 method) AWSGrib2Inventory (class in schimpy.hrr3)

B

barotropic_pres_grad_xy (schimpy.params.HydroOutput attribute) BaseIO (class in schimpy.base_io) bilinear() (in module schimpy.stacked_dem_fill) BilinearMeshDensity (class in schimpy.lsc2) bottom_excursion_period (schimpy.params.WindWaveOutput attribute) bottom_stress_xy (schimpy.params.HydroOutput attribute)

bottom_wave_period (schimpy.params.WindWaveOutput attribute) bound_linear() (in module schimpy.bound_linear) Boundary (class in schimpy.sms2gr3) bounding_coords() (in module schimpy.clip_dems) btrack_nudge (schimpy.params.Opt attribute) bucket (schimpy.hrr3.AWSGrib2Inventory property) build_iof_dict() (in module schimpy.params)

C

calc_f() (in module schimpy.contour_smooth) calculate_quadrature_points_and_weights() (schimpy.gaussian_quadrature.GaussianQuadrature method) (schimpy.gaussian_quadrature.GaussianQuadratureLine2 method) (schimpy.gaussian_quadrature.GaussianQuadratureQuad4 method) (schimpy.gaussian_quadrature.GaussianQuadratureTri3 method) cdec_header() (in module schimpy.write_ts) cencoos_schism_opendap() (in module schimpy.cencoos_download) charnock_coeff (schimpy.params.WindWaveOutput attribute) clip() (in module schimpy.model_time) clip_dem() (in module schimpy.clip_dems) coerce_to_type() (in module schimpy.params) combine() (in module schimpy.combine_consume) combine_consume() (in module schimpy.combine_consume) combine_flux() (in module schimpy.combine_flux) combine_hotstart() (in module schimpy.combine_consume) contains() (schimpy.schism_polygon.SchismPolygon method) continuous_peak_period (schimpy.params.WindWaveOutput attribute) contour_smooth() (in module schimpy.contour_smooth) contour_smooth2d() (in module schimpy.contour_smooth) convert_2dm() (in module schimpy.sms2gr3) coord (schimpy.schism_source.SchismSource property) coords (schimpy.schism_structure.SchismStructure property) copy() (schimpy.param.Params method) Core (class in schimpy.params) core (schimpy.params.Params attribute) coricoef (schimpy.params.Opt attribute)

courant_weno (schimpy.params.Opt attribute) create_arg_parser() (in module schimpy.clip_dems) (in module schimpy.combine_consume) (in module schimpy.combine_flux) (in module schimpy.contour_smooth) (in module schimpy.convert_linestrings) (in module schimpy.convert_polygons) (in module schimpy.cruise) (in module schimpy.download_hrrr) (in module schimpy.embed_raster) (in module schimpy.hotstart_inventory) (in module schimpy.interpolate_structure) (in module schimpy.material_poly) (in module schimpy.merge_th) (in module schimpy.model_time) (in module schimpy.separate_species) (in module schimpy.simulation_timing) (in module schimpy.sms2gr3) (in module schimpy.stacked_dem_fill) (in module schimpy.subset_schism_output) create_params() (in module schimpy.params) create_partition() (in module schimpy.subset_schism_output) create_poly() (in module schimpy.material_poly) cruise_xyt() (in module schimpy.cruise) CubicLSC2MeshFunction (class in schimpy.lsc2) cur_wwm (schimpy.params.Opt attribute)

D

default_num_layers() (in module schimpy.lsc2) default_num_layers0() (in module schimpy.lsc2) density() (schimpy.lsc2.BilinearMeshDensity method) (schimpy.lsc2.CubicLSC2MeshFunction method) depth() (schimpy.lsc2.BilinearMeshDensity method) (schimpy.lsc2.CubicLSC2MeshFunction method) depth_avg_vel_xy (schimpy.params.HydroOutput attribute) describe_elapsed() (in module schimpy.model_time) describe_timestamps() (in module schimpy.model_time) detect_min_max_index() (in module schimpy.combine_consume) dfh0 (schimpy.params.Opt attribute) dfv0 (schimpy.params.Opt attribute) diff() (schimpy.param.Params method) diffusivity (schimpy.params.HydroOutput attribute) discrete_peak_direction (schimpy.params.WindWaveOutput attribute) diss_rate_bott_friction (schimpy.params.WindWaveOutput attribute) diss_rate_dep_breaking (schimpy.params.WindWaveOutput attribute) diss_rate_vegetation (schimpy.params.WindWaveOutput attribute) diss_rate_whitecapping (schimpy.params.WindWaveOutput attribute) do_combine() (in module schimpy.combine_consume)

do_combine_hotstart() (in module schimpy.combine_consume) do_depth_plot() (in module schimpy.cruise) domain_size() (schimpy.gaussian_quadrature.GaussianQuadrature method) (schimpy.gaussian_quadrature.GaussianQuadratureLine2 method) (schimpy.gaussian_quadrature.GaussianQuadratureQuad4 method) (schimpy.gaussian_quadrature.GaussianQuadratureTri3 method) dominant_direction (schimpy.params.WindWaveOutput attribute) download_hrr() (in module schimpy.download_hrrr) downward_longwave (schimpy.params.HydroOutput attribute) dramp (schimpy.params.Opt attribute) dramp_ss (schimpy.params.Opt attribute) drampbc (schimpy.params.Opt attribute) drampwafo (schimpy.params.Opt attribute) drampwind (schimpy.params.Opt attribute) dry_flag_node (schimpy.params.HydroOutput attribute) dt (schimpy.params.Core attribute) dtb_max (schimpy.params.Opt attribute) dtb_min (schimpy.params.Opt attribute) dump() (in module schimpy.schism_yaml) dzb_min (schimpy.params.Opt attribute)

E

eco_class (schimpy.params.Core attribute) element_id (schimpy.schism_source.SchismSource property) elevation (schimpy.params.HydroOutput attribute) embed_raster() (in module schimpy.embed_raster) energy_input_atmos (schimpy.params.WindWaveOutput attribute) ensure_offset() (in module schimpy.interpolate_structure) eos_a (schimpy.params.Opt attribute) eos_b (schimpy.params.Opt attribute) eps1_tvd_imp (schimpy.params.Opt attribute)

eps2_tvd_imp (schimpy.params.Opt attribute) epsilon1 (schimpy.params.Opt attribute) epsilon2 (schimpy.params.Opt attribute) epsilon3 (schimpy.params.Opt attribute) evaporation_rate (schimpy.params.HydroOutput attribute) example() (in module schimpy.lsc2) (in module schimpy.vgrid_opt2) example2() (in module schimpy.lsc2) example3() (in module schimpy.lsc2)

F

failed_incomplete() (in module schimpy.combine_consume) file_to_elapsed() (in module schimpy.model_time) file_to_timestamp() (in module schimpy.model_time) filelist_main() (in module schimpy.stacked_dem_fill) files (schimpy.hrr3.AWSGrib2Inventory property) fill_2dm() (in module schimpy.stacked_dem_fill) fill_gr3() (in module schimpy.stacked_dem_fill) FindMultiPoly() (in module schimpy.geo_tools) fix_depth() (in module schimpy.vgrid_opt2) flag_fib (schimpy.params.Opt attribute)

flag_ic (schimpy.params.Opt attribute) flip_sigma() (in module schimpy.lsc2) frictional_velocity (schimpy.params.WindWaveOutput attribute) from_iof_array() (schimpy.params.OutControls method) fwvor_advxy_stokes (schimpy.params.Opt attribute) fwvor_advz_stokes (schimpy.params.Opt attribute) fwvor_breaking (schimpy.params.Opt attribute) fwvor_gradpress (schimpy.params.Opt attribute) fwvor_streaming (schimpy.params.Opt attribute) fwvor_wveg (schimpy.params.Opt attribute) fwvor_wveg_NL (schimpy.params.Opt attribute)

G

gather_ppf_names() (in module schimpy.combine_consume) GaussianQuadrature (class in schimpy.gaussian_quadrature) GaussianQuadratureLine2 (class in schimpy.gaussian_quadrature) GaussianQuadratureQuad4 (class in schimpy.gaussian_quadrature) GaussianQuadratureTri3 (class in schimpy.gaussian_quadrature) gen_profile_plot() (in module schimpy.cruise) gen_sflux() (schimpy.hrr3.HRRR method) gen_sigma() (in module schimpy.lsc2) gen_station_xyt() (in module schimpy.cruise) gen_wsett (schimpy.params.Opt attribute) geometry2coords() (in module schimpy.geo_tools) geometry2coords_points() (in module schimpy.geo_tools) get_hotstart_freq() (schimpy.param.Params method) get_index_bounds() (in module schimpy.profile_plot)

get_interval() (schimpy.param.Params method) get_iof_array_names() (schimpy.params.OutControls method) get_nc_out_freq() (schimpy.param.Params method) get_nc_stack() (schimpy.param.Params method) get_reader() (schimpy.schism_linestring.LineStringIoFactory method) (schimpy.schism_polygon.SchismPolygonIoFactory method) get_run_start() (schimpy.param.Params method) get_station_out_freq() (schimpy.param.Params method) get_tracer_names() (schimpy.params.TracerGenOutput method) get_type_dict() (in module schimpy.params) get_value_dict() (in module schimpy.params) get_writer() (schimpy.schism_linestring.LineStringIoFactory method) (schimpy.schism_polygon.SchismPolygonIoFactory method) gradient_matrix() (in module schimpy.vgrid_opt2)

H

h0 (schimpy.params.Opt attribute) h1_bcc (schimpy.params.Opt attribute) h1_pp (schimpy.params.Opt attribute) h2_bcc (schimpy.params.Opt attribute) h2_pp (schimpy.params.Opt attribute) h_bcc1 (schimpy.params.Opt attribute) h_massconsv (schimpy.params.Opt attribute) h_tvd (schimpy.params.Opt attribute) hess_base() (in module schimpy.vgrid_opt2) hmin_airsea_ex (schimpy.params.Opt attribute) hmin_man (schimpy.params.Opt attribute)

hmin_radstress (schimpy.params.Opt attribute) hmin_salt_ex (schimpy.params.Opt attribute) horizontal_side_vel_xy (schimpy.params.HydroOutput attribute) horizontal_vel_xy (schimpy.params.HydroOutput attribute) hotstart_freq (schimpy.param.Params property) hotstart_inventory() (in module schimpy.hotstart_inventory) hotstart_inventory2() (in module schimpy.hotstart_inventory) HRRR (class in schimpy.hrr3) hvis_coef0 (schimpy.params.Opt attribute) hw_depth (schimpy.params.Opt attribute) hw_ratio (schimpy.params.Opt attribute) HydroOutput (class in schimpy.params)

I

i_hmin_airsea_ex (schimpy.params.Opt attribute) i_hmin_salt_ex (schimpy.params.Opt attribute) i_prtnftl_weno (schimpy.params.Opt attribute) iadjust_mass_consv0 (schimpy.params.Opt attribute) ibc (schimpy.params.Core attribute) ibcc_mean (schimpy.params.Opt attribute) ibdef (schimpy.params.Opt attribute) ibtp (schimpy.params.Core attribute) ibtrack_test (schimpy.params.Opt attribute) ic_elev (schimpy.params.Opt attribute) ic_to_gpd() (in module schimpy.geo_tools) icou_elfe_wwm (schimpy.params.Opt attribute) ics (schimpy.params.Opt attribute) ielad_weno (schimpy.params.Opt attribute) ielm_transport (schimpy.params.Opt attribute) ieos_pres (schimpy.params.Opt attribute) ieos_type (schimpy.params.Opt attribute) if_source (schimpy.params.Opt attribute) iflux (schimpy.params.Opt attribute) iflux_out_format (schimpy.params.Opt attribute) iharind (schimpy.params.Opt attribute) ihconsv (schimpy.params.Opt attribute) ihdif (schimpy.params.Opt attribute) ihfskip (schimpy.params.Core attribute) ihhat (schimpy.params.Opt attribute) ihorcon (schimpy.params.Opt attribute) ihot (schimpy.params.Opt attribute) ihydraulics (schimpy.params.Opt attribute) iloadtide (schimpy.params.Opt attribute) imm (schimpy.params.Opt attribute) incr_grad() (in module schimpy.vgrid_opt2) index_interior() (in module schimpy.vgrid_opt2) indvel (schimpy.params.Opt attribute) integrate() (schimpy.gaussian_quadrature.GaussianQuadrature method) inter_mom (schimpy.params.Opt attribute) interp() (schimpy.interp_2d.Invdisttree method) interpolate_structure() (in module schimpy.interpolate_structure) intersects() (schimpy.schism_polygon.SchismPolygon method) inu_elev (schimpy.params.Opt attribute) inu_tr (schimpy.params.Opt attribute) inu_uv (schimpy.params.Opt attribute) inunfl (schimpy.params.Opt attribute) inv_atm_bnd (schimpy.params.Opt attribute)

Invdisttree (class in schimpy.interp_2d) inverse() (schimpy.three_point_linear_norm.ThreePointLinearNorm method) iof_age (schimpy.params.Schout attribute) iof_ana (schimpy.params.Schout attribute) iof_cos (schimpy.params.Schout attribute) iof_dvd (schimpy.params.Schout attribute) iof_eco (schimpy.params.Schout attribute) iof_fib (schimpy.params.Schout attribute) iof_gen (schimpy.params.Schout attribute) iof_hydro (schimpy.params.Schout attribute) iof_ice (schimpy.params.Schout attribute) iof_icm_ba (schimpy.params.Schout attribute) iof_icm_cbp (schimpy.params.Schout attribute) iof_icm_core (schimpy.params.Schout attribute) iof_icm_dbg (schimpy.params.Schout attribute) iof_icm_ph (schimpy.params.Schout attribute) iof_icm_sav (schimpy.params.Schout attribute) iof_icm_sed (schimpy.params.Schout attribute) iof_icm_silica (schimpy.params.Schout attribute) iof_icm_veg (schimpy.params.Schout attribute) iof_icm_zb (schimpy.params.Schout attribute) iof_marsh (schimpy.params.Schout attribute) iof_sed (schimpy.params.Schout attribute) iof_sed2d (schimpy.params.Schout attribute) iof_ugrid (schimpy.params.Schout attribute) iof_wwm (schimpy.params.Schout attribute) iout_sta (schimpy.params.Schout attribute) ip_weno (schimpy.params.Opt attribute) ipre (schimpy.params.Core attribute) ipre2 (schimpy.params.Opt attribute) iprecip_off_bnd (schimpy.params.Opt attribute) irouse_test (schimpy.params.Opt attribute) isav (schimpy.params.Opt attribute) isconsv (schimpy.params.Opt attribute) ishapiro (schimpy.params.Opt attribute) itr_met (schimpy.params.Opt attribute) itransport_only (schimpy.params.Opt attribute) itur (schimpy.params.Opt attribute) iunder_deep (schimpy.params.Opt attribute) iupwind_mom (schimpy.params.Opt attribute) iwbl (schimpy.params.Opt attribute) iwind_form (schimpy.params.Opt attribute) iwindoff (schimpy.params.Opt attribute) izonal5 (schimpy.params.Opt attribute)

J

jacobian() (schimpy.gaussian_quadrature.GaussianQuadratureQuad4 method) (schimpy.gaussian_quadrature.GaussianQuadratureTri3 method)

jacobian_det() (schimpy.gaussian_quadrature.GaussianQuadrature method) (schimpy.gaussian_quadrature.GaussianQuadratureLine2 method) (schimpy.gaussian_quadrature.GaussianQuadratureTri3 method)

K

kr_co (schimpy.params.Opt attribute)

L

label_components() (in module schimpy.lsc2) laplace2() (in module schimpy.vgrid_opt2) laplace_smooth_data() (in module schimpy.laplace_smooth_data) laplace_smooth_data2() (in module schimpy.laplace_smooth_data) laplace_smooth_with_vel() (in module schimpy.laplace_smooth_data) laplace_smooth_with_vel2() (in module schimpy.laplace_smooth_data) laplace_smooth_with_vel3() (in module schimpy.laplace_smooth_data) latent_heat (schimpy.params.HydroOutput attribute) lev_tr_source (schimpy.params.Opt attribute) level_age (schimpy.params.Opt attribute) linecounter (schimpy.base_io.BaseIO property) LineString (class in schimpy.schism_linestring)

LineStringIo (class in schimpy.schism_linestring) LineStringIoFactory (class in schimpy.schism_linestring) LineStringShapefileReader (class in schimpy.schism_linestring) LineStringShapefileWriter (class in schimpy.schism_linestring) LineStringYamlReader (class in schimpy.schism_linestring) LineStringYamlWriter (class in schimpy.schism_linestring) ll2utm() (in module schimpy.geo_tools) load() (in module schimpy.schism_yaml) loadtide_coef (schimpy.params.Opt attribute) localize_datetime() (in module schimpy.hrr3) longitudinal() (in module schimpy.cruise) lowest_layer_height() (in module schimpy.lsc2)

M

main() (in module schimpy.clip_dems) (in module schimpy.combine_consume) (in module schimpy.combine_flux) (in module schimpy.contour_smooth) (in module schimpy.convert_linestrings) (in module schimpy.convert_polygons) (in module schimpy.cruise) (in module schimpy.download_hrrr) (in module schimpy.hotstart_inventory) (in module schimpy.interpolate_structure) (in module schimpy.merge_th) (in module schimpy.model_time) (in module schimpy.separate_species) (in module schimpy.stacked_dem_fill) map_to_dict() (in module schimpy.nml) map_to_object() (in module schimpy.nml) match_cruise() (in module schimpy.cruise) max_subcyc (schimpy.params.Opt attribute) mdc2 (schimpy.params.Core attribute) mean_dir_spreading (schimpy.params.WindWaveOutput attribute) mean_wave_direction (schimpy.params.WindWaveOutput attribute) mean_wave_length (schimpy.params.WindWaveOutput attribute) mean_wave_number (schimpy.params.WindWaveOutput attribute) mean_wave_period (schimpy.params.WindWaveOutput attribute) merc_to_latlon() (in module schimpy.cencoos_download) merge_th() (in module schimpy.merge_th) mesh_function_depths() (in module schimpy.lsc2) mesh_opt() (in module schimpy.vgrid_opt2) meshessp() (in module schimpy.vgrid_opt2) meshgrad() (in module schimpy.vgrid_opt2) meshobj() (in module schimpy.vgrid_opt2) meth_sink (schimpy.params.Opt attribute) mid (schimpy.params.Opt attribute) mixing_length (schimpy.params.HydroOutput attribute) model_data_for_longitude() (in module schimpy.cruise) modified_latlon() (schimpy.hrr3.HRRR method) module schimpy schimpy.base_io schimpy.bound_linear schimpy.cencoos_download schimpy.clip_dems schimpy.combine_consume schimpy.combine_flux schimpy.contour_smooth schimpy.convert_linestrings schimpy.convert_polygons schimpy.cruise schimpy.download_hrrr schimpy.embed_raster schimpy.gaussian_quadrature schimpy.geo_tools schimpy.hotstart_inventory schimpy.hrr3 schimpy.interp_2d schimpy.interpolate_structure schimpy.laplace_smooth_data schimpy.lsc2 schimpy.material_poly schimpy.merge_th schimpy.metricsplot schimpy.model_time schimpy.nml schimpy.param schimpy.params schimpy.plot_default_formats schimpy.priority_queue schimpy.profile_plot schimpy.raster_to_nodes schimpy.read_output_xyt schimpy.schism_linestring schimpy.schism_polygon schimpy.schism_source schimpy.schism_structure schimpy.schism_vertical_mesh schimpy.schism_yaml schimpy.separate_species schimpy.simulation_timing schimpy.sms2gr3 schimpy.stacked_dem_fill schimpy.subset_schism_output schimpy.three_point_linear_norm schimpy.unit_conversions schimpy.vgrid_opt2 schimpy.write_ts

moitn0 (schimpy.params.Opt attribute) msc2 (schimpy.params.Core attribute) multi_file_to_elapsed() (in module schimpy.model_time) mxitn0 (schimpy.params.Opt attribute)

N

n_duplicate (schimpy.schism_structure.SchismStructure property) n_node_pairs() (schimpy.schism_structure.SchismStructure method) nadv (schimpy.params.Opt attribute) name (schimpy.params.Core attribute) (schimpy.params.HydroOutput attribute) (schimpy.params.Opt attribute) (schimpy.params.OutControls attribute) (schimpy.params.Schout attribute) (schimpy.params.TracerGenOutput attribute) (schimpy.params.WindWaveOutput attribute) (schimpy.schism_polygon.SchismPolygon property) (schimpy.schism_structure.SchismStructure property) Namelist (class in schimpy.nml) nc_out (schimpy.params.Schout attribute) nc_out_freq (schimpy.param.Params property) nc_stack (schimpy.param.Params property) nchi (schimpy.params.Opt attribute) ncor (schimpy.params.Opt attribute) nearest_cycle() (in module schimpy.hrr3)

nearest_neighbor_fill() (in module schimpy.profile_plot) nhot (schimpy.params.Schout attribute) nhot_write (schimpy.params.Schout attribute) niter_shap (schimpy.params.Opt attribute) node_pairs (schimpy.schism_structure.SchismStructure property) note (schimpy.schism_source.SchismSource property) nquad (schimpy.params.Opt attribute) nramp_elev (schimpy.params.Opt attribute) nspool (schimpy.params.Core attribute) nspool_sta (schimpy.params.Schout attribute) nstep_ice (schimpy.params.Opt attribute) nstep_wwm (schimpy.params.Opt attribute) ntd_weno (schimpy.params.Opt attribute) ntracer_age (schimpy.params.Core attribute) ntracer_gen (schimpy.params.Core attribute) (schimpy.params.TracerGenOutput attribute) nu_sum_mult (schimpy.params.Opt attribute) number_of_quadrature_points() (schimpy.gaussian_quadrature.GaussianQuadrature method) nws (schimpy.params.Opt attribute)

O

Opt (class in schimpy.params) opt (schimpy.params.Params attribute)

orbital_velocity (schimpy.params.WindWaveOutput attribute) OutControls (class in schimpy.params) output_interval (schimpy.hrr3.AWSGrib2Inventory property)

P

param_from_template() (in module schimpy.param) Params (class in schimpy.param) (class in schimpy.params) parse() (in module schimpy.nml) ParseType() (in module schimpy.stacked_dem_fill) partition_check() (in module schimpy.geo_tools) partition_schout() (in module schimpy.subset_schism_output) partition_scribeio() (in module schimpy.subset_schism_output) peak_group_vel (schimpy.params.WindWaveOutput attribute) peak_n_factor (schimpy.params.WindWaveOutput attribute) peak_period (schimpy.params.WindWaveOutput attribute) peak_phase_vel (schimpy.params.WindWaveOutput attribute) peak_spreading (schimpy.params.WindWaveOutput attribute) peak_wave_length (schimpy.params.WindWaveOutput attribute) peak_wave_number (schimpy.params.WindWaveOutput attribute) plot_comparison() (in module schimpy.metricsplot) plot_mesh() (in module schimpy.lsc2) plot_metrics() (in module schimpy.metricsplot)

plot_result() (in module schimpy.separate_species) Polylen() (in module schimpy.geo_tools) precipitation_rate (schimpy.params.HydroOutput attribute) priorityDictionary (class in schimpy.priority_queue) prmsl_ref (schimpy.params.Opt attribute) process_cruise() (in module schimpy.cruise) process_default() (schimpy.param.Params method) process_orphans() (in module schimpy.lsc2) process_orphans2() (in module schimpy.lsc2) process_stations() (in module schimpy.cruise) process_xyt() (in module schimpy.cruise) profile_plot() (in module schimpy.profile_plot) project_fun() (in module schimpy.geo_tools) prop (schimpy.schism_linestring.LineString property) (schimpy.schism_polygon.SchismPolygon property) properties (schimpy.schism_structure.SchismStructure property) prune_dated() (in module schimpy.model_time) prune_ppf_files() (in module schimpy.combine_consume)

Q

quadrature_vector() (schimpy.gaussian_quadrature.GaussianQuadrature method)

R

raster_to_nodes() (in module schimpy.raster_to_nodes) RasterWrapper (class in schimpy.contour_smooth) read() (schimpy.schism_linestring.LineStringIo method) (schimpy.schism_linestring.LineStringShapefileReader method) (schimpy.schism_linestring.LineStringYamlReader method) (schimpy.schism_polygon.SchismPolygonDictConverter method) (schimpy.schism_polygon.SchismPolygonIo method) (schimpy.schism_polygon.SchismPolygonShapefileReader method) (schimpy.schism_polygon.SchismPolygonYamlReader method) (schimpy.schism_source.SchismSourceIO method) (schimpy.schism_structure.SchismStructureIO method) read_data() (in module schimpy.merge_th) read_depth_avg_from_output7b_xyt() (in module schimpy.read_output_xyt) read_keyfile() (in module schimpy.material_poly) read_linestrings() (in module schimpy.schism_linestring) read_locations_from_input() (in module schimpy.merge_th) read_params() (in module schimpy.param) read_polygons() (in module schimpy.schism_polygon) read_sources() (in module schimpy.schism_source) read_th_spec() (in module schimpy.merge_th)

read_vmesh() (in module schimpy.schism_vertical_mesh) rearth_eq (schimpy.params.Opt attribute) rearth_pole (schimpy.params.Opt attribute) records() (in module schimpy.subset_schism_output) reference (schimpy.schism_structure.SchismStructure property) reference_pair (schimpy.schism_structure.SchismStructure property) registered_readers (schimpy.schism_linestring.LineStringIoFactory attribute) (schimpy.schism_polygon.SchismPolygonIoFactory attribute) registered_writers (schimpy.schism_linestring.LineStringIoFactory attribute) (schimpy.schism_polygon.SchismPolygonIoFactory attribute) rho0 (schimpy.params.Opt attribute) rinflation_icm (schimpy.params.Opt attribute) rlatitude (schimpy.params.Opt attribute) rmaxvel (schimpy.params.Opt attribute) rms_orbital_velocity (schimpy.params.WindWaveOutput attribute) rnday (schimpy.params.Core attribute) roller_diss_rate (schimpy.params.WindWaveOutput attribute) roughness_length (schimpy.params.WindWaveOutput attribute) rtol0 (schimpy.params.Opt attribute) run_example() (in module schimpy.separate_species) run_start (schimpy.param.Params property)

S

s1_mxnbt (schimpy.params.Opt attribute) s2_mxnbt (schimpy.params.Opt attribute) s3 (schimpy.hrr3.AWSGrib2Inventory property) salinity (schimpy.params.HydroOutput attribute) salinity_at_element (schimpy.params.HydroOutput attribute) save_smooth() (in module schimpy.contour_smooth) scaled() (schimpy.three_point_linear_norm.ThreePointLinearNorm method) schimpy module schimpy.base_io module schimpy.bound_linear module schimpy.cencoos_download module schimpy.clip_dems module schimpy.combine_consume module schimpy.combine_flux module schimpy.contour_smooth module schimpy.convert_linestrings module schimpy.convert_polygons module schimpy.cruise module schimpy.download_hrrr module schimpy.embed_raster module schimpy.gaussian_quadrature module schimpy.geo_tools module schimpy.hotstart_inventory module schimpy.hrr3 module schimpy.interp_2d module schimpy.interpolate_structure module schimpy.laplace_smooth_data module schimpy.lsc2 module schimpy.material_poly module schimpy.merge_th module schimpy.metricsplot module schimpy.model_time module schimpy.nml module schimpy.param module schimpy.params module schimpy.plot_default_formats module schimpy.priority_queue module schimpy.profile_plot module schimpy.raster_to_nodes module schimpy.read_output_xyt module schimpy.schism_linestring module schimpy.schism_polygon module schimpy.schism_source module schimpy.schism_structure module schimpy.schism_vertical_mesh module schimpy.schism_yaml module schimpy.separate_species module

schimpy.simulation_timing module schimpy.sms2gr3 module schimpy.stacked_dem_fill module schimpy.subset_schism_output module schimpy.three_point_linear_norm module schimpy.unit_conversions module schimpy.vgrid_opt2 module schimpy.write_ts module schism_timing() (in module schimpy.simulation_timing) SchismPolygon (class in schimpy.schism_polygon) SchismPolygonDictConverter (class in schimpy.schism_polygon) SchismPolygonIo (class in schimpy.schism_polygon) SchismPolygonIoFactory (class in schimpy.schism_polygon) SchismPolygonShapefileReader (class in schimpy.schism_polygon) SchismPolygonShapefileWriter (class in schimpy.schism_polygon) SchismPolygonYamlReader (class in schimpy.schism_polygon) SchismPolygonYamlWriter (class in schimpy.schism_polygon) SchismSource (class in schimpy.schism_source) SchismSourceIO (class in schimpy.schism_source) SchismStructure (class in schimpy.schism_structure) SchismStructureIO (class in schimpy.schism_structure) Schout (class in schimpy.params) schout (schimpy.params.Params attribute) searchfor() (schimpy.param.Params method) sections() (schimpy.param.Params method) sed_class (schimpy.params.Core attribute) sensible_heat (schimpy.params.HydroOutput attribute) separate_species() (in module schimpy.separate_species) set_color_cycle_dark2() (in module schimpy.plot_default_formats) set_dual_axes() (in module schimpy.plot_default_formats) set_dual_axes_elev() (in module schimpy.plot_default_formats) set_dual_axes_salt() (in module schimpy.plot_default_formats) set_hotstart_freq() (schimpy.param.Params method) set_index_bounds() (in module schimpy.profile_plot) set_interval() (schimpy.param.Params method) set_nc_out_freq() (schimpy.param.Params method) set_nc_stack() (schimpy.param.Params method) set_run_start() (schimpy.param.Params method) set_station_out_freq() (schimpy.param.Params method) setdefault() (schimpy.priority_queue.priorityDictionary method) setup() (in module schimpy.combine_consume) sfea0 (schimpy.params.Opt attribute) shape() (schimpy.gaussian_quadrature.GaussianQuadrature method) (schimpy.gaussian_quadrature.GaussianQuadratureLine2 method) (schimpy.gaussian_quadrature.GaussianQuadratureQuad4 method) (schimpy.gaussian_quadrature.GaussianQuadratureTri3 method) shape_derivative() (schimpy.gaussian_quadrature.GaussianQuadrature method) (schimpy.gaussian_quadrature.GaussianQuadratureLine2 method) (schimpy.gaussian_quadrature.GaussianQuadratureQuad4 method) (schimpy.gaussian_quadrature.GaussianQuadratureTri3 method) shapely_to_geopandas() (in module schimpy.geo_tools) shapiro0 (schimpy.params.Opt attribute) shorewafo (schimpy.params.Opt attribute) show_registered_readers() (schimpy.schism_polygon.SchismPolygonIoFactory method) shp2yaml() (in module schimpy.geo_tools) shw (schimpy.params.Opt attribute) sig_wave_height (schimpy.params.WindWaveOutput attribute) sigma_z() (in module schimpy.lsc2) slam0 (schimpy.params.Opt attribute) slr_rate (schimpy.params.Opt attribute) small_elad (schimpy.params.Opt attribute) smallest() (schimpy.priority_queue.priorityDictionary method) smooth_bed() (in module schimpy.lsc2) smooth_heights() (in module schimpy.vgrid_opt2) solar_radiation (schimpy.params.HydroOutput attribute) specific_humidity (schimpy.params.HydroOutput attribute) split() (in module schimpy.combine_consume) stab (schimpy.params.Opt attribute) stacked_dem_fill() (in module schimpy.stacked_dem_fill) start_day (schimpy.params.Opt attribute) start_hour (schimpy.params.Opt attribute) start_month (schimpy.params.Opt attribute) start_year (schimpy.params.Opt attribute) station_out_freq (schimpy.param.Params property) step_nu_tr (schimpy.params.Opt attribute) subset_schism_output() (in module schimpy.subset_schism_output) subset_schism_scribeIO_output() (in module schimpy.subset_schism_output) szcoord() (in module schimpy.lsc2)

T

targeth2inv() (in module schimpy.vgrid_opt2) tdmin_pp1 (schimpy.params.Opt attribute) tdmin_pp2 (schimpy.params.Opt attribute) temperature (schimpy.params.HydroOutput attribute) temperature_at_element (schimpy.params.HydroOutput attribute) test_combine_flux() (in module schimpy.combine_flux) test_date_label_correct() (in module schimpy.interpolate_structure) test_gradients() (in module schimpy.vgrid_opt2) test_main() (in module schimpy.stacked_dem_fill) test_param() (in module schimpy.param) test_template_times() (in module schimpy.interpolate_structure) test_vgrid_spacing() (in module schimpy.vgrid_opt2) thetai (schimpy.params.Opt attribute) ThreePointLinearNorm (class in schimpy.three_point_linear_norm) time_block_report() (in module schimpy.cencoos_download) tm_10 (schimpy.params.WindWaveOutput attribute)

tmpdir (schimpy.hrr3.AWSGrib2Inventory property) to_dataframe() (schimpy.param.Params method) to_datetime() (in module schimpy.model_time) to_elapsed() (in module schimpy.model_time) to_iof_array() (schimpy.params.OutControls method) TopLevelNamelist (class in schimpy.nml) total_heat (schimpy.params.HydroOutput attribute) touch() (in module schimpy.combine_consume) TracerGenOutput (class in schimpy.params) triweight() (in module schimpy.vgrid_opt2) turbinj (schimpy.params.Opt attribute) turbinjds (schimpy.params.Opt attribute) turbulent_kinetic_ener (schimpy.params.HydroOutput attribute) type (schimpy.schism_polygon.SchismPolygon property) (schimpy.schism_source.SchismSource property) (schimpy.schism_structure.SchismStructure property)

U

u_resell_number (schimpy.params.WindWaveOutput attribute) update() (schimpy.param.Params method) upward_longwave (schimpy.params.HydroOutput attribute)

Usage() (in module schimpy.stacked_dem_fill) use_timeseries (schimpy.schism_structure.SchismStructure property) utc_start (schimpy.params.Opt attribute) utm2ll() (in module schimpy.geo_tools)

V

validate() (schimpy.param.Params method) values_at_quadrature_points() (schimpy.gaussian_quadrature.GaussianQuadrature method) vclose_surf_frac (schimpy.params.Opt attribute) vdmax_pp1 (schimpy.params.Opt attribute) vdmax_pp2 (schimpy.params.Opt attribute) vdmin_pp1 (schimpy.params.Opt attribute) vdmin_pp2 (schimpy.params.Opt attribute) velmin_btrack (schimpy.params.Opt attribute)

vertical_fill() (in module schimpy.profile_plot) vertical_vel_at_element (schimpy.params.HydroOutput attribute) vertical_velocity (schimpy.params.HydroOutput attribute) view_smooth() (in module schimpy.contour_smooth) viscosity (schimpy.params.HydroOutput attribute) vnf1 (schimpy.params.Opt attribute) vnf2 (schimpy.params.Opt attribute) vnh1 (schimpy.params.Opt attribute) vnh2 (schimpy.params.Opt attribute)

W

wafo_obcramp (schimpy.params.Opt attribute) water_density (schimpy.params.HydroOutput attribute) wave_energy_dir_x (schimpy.params.WindWaveOutput attribute) wave_energy_dir_y (schimpy.params.WindWaveOutput attribute) weights() (schimpy.interp_2d.Invdisttree method) wind_speed_xy (schimpy.params.HydroOutput attribute) wind_stress_xy (schimpy.params.HydroOutput attribute) WindWaveOutput (class in schimpy.params) write() (in module schimpy.nml) (schimpy.param.Params method) (schimpy.schism_linestring.LineStringIo method) (schimpy.schism_linestring.LineStringShapefileWriter method) (schimpy.schism_linestring.LineStringYamlWriter method) (schimpy.schism_polygon.SchismPolygonShapefileWriter method) (schimpy.schism_polygon.SchismPolygonYamlWriter method) (schimpy.schism_source.SchismSourceIO method) (schimpy.schism_structure.SchismStructureIO method)

write_copy() (schimpy.contour_smooth.RasterWrapper method) write_global_local_maps() (in module schimpy.subset_schism_output) write_linestrings() (in module schimpy.schism_linestring) write_polygons() (in module schimpy.schism_polygon) write_th() (in module schimpy.merge_th) (in module schimpy.separate_species) write_ts() (in module schimpy.write_ts) wtiminc (schimpy.params.Opt attribute)

X

xlsc0 (schimpy.params.Opt attribute)

Y

yaml2shp() (in module schimpy.geo_tools)

YamlAction (class in schimpy.schism_yaml)

Z

z_coordinates (schimpy.params.HydroOutput attribute)

z_sigma() (in module schimpy.lsc2) zero_downcross_period (schimpy.params.WindWaveOutput attribute)